Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Gm43822-201ENSMUST00000200285 476 ntBASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Srrm1Q52KI8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Srrm1Q52KI8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Srrm1Q52KI8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Srrm1Q52KI8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Srrm1Q52KI8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Srrm1Q52KI8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Srrm1Q52KI8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Gm13350-201ENSMUST00000120519 479 ntBASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Gm8810-201ENSMUST00000172895 754 ntBASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Srrm1Q52KI8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Gm12485-201ENSMUST00000119641 291 ntBASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Gm19184-201ENSMUST00000196798 928 ntBASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Gm8598-201ENSMUST00000221184 836 ntBASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srrm1Q52KI8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srrm1Q52KI8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srrm1Q52KI8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms