Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Gm14719-201ENSMUST00000121891 340 ntBASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cracr2aQ3UP38 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gm4875-201ENSMUST00000118257 786 ntBASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gm15393-201ENSMUST00000120499 219 ntBASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gm15487-201ENSMUST00000122373 465 ntBASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gm27437-201ENSMUST00000183429 107 ntBASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.21■□□□□ 0.03
Cracr2aQ3UP38 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cracr2aQ3UP38 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cracr2aQ3UP38 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cracr2aQ3UP38 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Gm12585-201ENSMUST00000117307 290 ntBASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cracr2aQ3UP38 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Cracr2aQ3UP38 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms