Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Gm9797-201ENSMUST00000052902 613 ntBASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nlrc4Q3UP24 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Gm6912-201ENSMUST00000117218 544 ntBASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Gm2445-201ENSMUST00000182798 989 ntBASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Gm42612-201ENSMUST00000197986 623 ntBASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Gm43170-201ENSMUST00000199827 612 ntBASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Nlrc4Q3UP24 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Syt7-205ENSMUST00000224135 1557 ntBASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nlrc4Q3UP24 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms