Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Q3KNL4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Q3KNL4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.69□□□□□ -0.22
Q3KNL4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.69□□□□□ -0.22
Q3KNL4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.69□□□□□ -0.22
Q3KNL4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.69□□□□□ -0.22
Q3KNL4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.69□□□□□ -0.22
Q3KNL4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.69□□□□□ -0.22
Q3KNL4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.69□□□□□ -0.22
Q3KNL4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Q3KNL4 Gm45612-201ENSMUST00000211320 160 ntBASIC13.69□□□□□ -0.22
Q3KNL4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.69□□□□□ -0.22
Q3KNL4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.69□□□□□ -0.22
Q3KNL4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3KNL4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.68□□□□□ -0.22
Q3KNL4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Gm11745-201ENSMUST00000121669 448 ntBASIC13.68□□□□□ -0.22
Q3KNL4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.68□□□□□ -0.22
Q3KNL4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.68□□□□□ -0.22
Q3KNL4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.68□□□□□ -0.22
Q3KNL4 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.68□□□□□ -0.22
Q3KNL4 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.68□□□□□ -0.22
Q3KNL4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Q3KNL4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Q3KNL4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3KNL4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.67□□□□□ -0.22
Q3KNL4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Q3KNL4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Q3KNL4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.67□□□□□ -0.22
Q3KNL4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.67□□□□□ -0.22
Q3KNL4 Gm15957-201ENSMUST00000118893 974 ntBASIC13.67□□□□□ -0.22
Q3KNL4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.67□□□□□ -0.22
Q3KNL4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q3KNL4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
Q3KNL4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.67□□□□□ -0.22
Q3KNL4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.67□□□□□ -0.22
Q3KNL4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms