Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Gm13015-201ENSMUST00000118674 204 ntBASIC14.03□□□□□ -0.16
Pfdn6Q03958 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Gm27702-201ENSMUST00000184512 56 ntBASIC14.03□□□□□ -0.16
Pfdn6Q03958 Gm7774-201ENSMUST00000200064 533 ntBASIC14.03□□□□□ -0.16
Pfdn6Q03958 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Chchd1-203ENSMUST00000224633 557 ntBASIC14.03□□□□□ -0.16
Pfdn6Q03958 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.03□□□□□ -0.16
Pfdn6Q03958 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.03□□□□□ -0.16
Pfdn6Q03958 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.02□□□□□ -0.16
Pfdn6Q03958 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Pfdn6Q03958 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.02□□□□□ -0.16
Pfdn6Q03958 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn6Q03958 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Gm27631-201ENSMUST00000184163 466 ntBASIC14.02□□□□□ -0.17
Pfdn6Q03958 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Mir125a-201ENSMUST00000083545 68 ntBASIC14.02□□□□□ -0.17
Pfdn6Q03958 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn6Q03958 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn6Q03958 Gm18766-201ENSMUST00000189811 808 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms