Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VcpQ01853 Gm15806-201ENSMUST00000120696 955 ntBASIC14.87□□□□□ -0.03
VcpQ01853 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VcpQ01853 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.87□□□□□ -0.03
VcpQ01853 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.87□□□□□ -0.03
VcpQ01853 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.87□□□□□ -0.03
VcpQ01853 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.87□□□□□ -0.03
VcpQ01853 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VcpQ01853 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.87□□□□□ -0.03
VcpQ01853 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.87□□□□□ -0.03
VcpQ01853 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.87□□□□□ -0.03
VcpQ01853 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VcpQ01853 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VcpQ01853 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VcpQ01853 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.86□□□□□ -0.03
VcpQ01853 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VcpQ01853 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Gm12742-201ENSMUST00000117326 410 ntBASIC14.86□□□□□ -0.03
VcpQ01853 Gm9719-201ENSMUST00000162765 543 ntBASIC14.86□□□□□ -0.03
VcpQ01853 Gm27892-201ENSMUST00000185017 106 ntBASIC14.86□□□□□ -0.03
VcpQ01853 Gm43703-201ENSMUST00000200523 763 ntBASIC14.86□□□□□ -0.03
VcpQ01853 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.86□□□□□ -0.03
VcpQ01853 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VcpQ01853 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.86□□□□□ -0.03
VcpQ01853 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
VcpQ01853 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VcpQ01853 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VcpQ01853 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
VcpQ01853 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcpQ01853 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VcpQ01853 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.85□□□□□ -0.03
VcpQ01853 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
VcpQ01853 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.85□□□□□ -0.03
VcpQ01853 Gm18624-201ENSMUST00000220966 658 ntBASIC14.85□□□□□ -0.03
VcpQ01853 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
VcpQ01853 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
VcpQ01853 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
VcpQ01853 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcpQ01853 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VcpQ01853 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms