Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.18□□□□□ -0.3
Nkx3-2P97503 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Gm15460-201ENSMUST00000118147 391 ntBASIC13.18□□□□□ -0.3
Nkx3-2P97503 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Gm9522-201ENSMUST00000182394 926 ntBASIC13.18□□□□□ -0.3
Nkx3-2P97503 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.18□□□□□ -0.3
Nkx3-2P97503 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nkx3-2P97503 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx3-2P97503 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.17□□□□□ -0.3
Nkx3-2P97503 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.17□□□□□ -0.3
Nkx3-2P97503 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Gm12859-201ENSMUST00000117834 427 ntBASIC13.17□□□□□ -0.3
Nkx3-2P97503 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.17□□□□□ -0.3
Nkx3-2P97503 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.17□□□□□ -0.3
Nkx3-2P97503 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms