Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm24526-201ENSMUST00000082921 158 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm24447-201ENSMUST00000083977 338 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.37■□□□□ 0.37
Smarcc1P97496 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.37■□□□□ 0.37
Smarcc1P97496 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc1P97496 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smarcc1P97496 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcc1P97496 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.36■□□□□ 0.37
Smarcc1P97496 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.36■□□□□ 0.37
Smarcc1P97496 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcc1P97496 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.36■□□□□ 0.37
Smarcc1P97496 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcc1P97496 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smarcc1P97496 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc1P97496 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Smarcc1P97496 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smarcc1P97496 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smarcc1P97496 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Gm4271-201ENSMUST00000174444 973 ntBASIC17.35■□□□□ 0.37
Smarcc1P97496 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.35■□□□□ 0.37
Smarcc1P97496 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smarcc1P97496 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarcc1P97496 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.35■□□□□ 0.37
Smarcc1P97496 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smarcc1P97496 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcc1P97496 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smarcc1P97496 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smarcc1P97496 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.34■□□□□ 0.37
Smarcc1P97496 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smarcc1P97496 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.34■□□□□ 0.37
Smarcc1P97496 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Gm18056-201ENSMUST00000207670 568 ntBASIC17.34■□□□□ 0.37
Smarcc1P97496 Gm18061-201ENSMUST00000208350 562 ntBASIC17.34■□□□□ 0.37
Smarcc1P97496 Gm18063-201ENSMUST00000208529 568 ntBASIC17.34■□□□□ 0.37
Smarcc1P97496 Gm18052-201ENSMUST00000208750 559 ntBASIC17.34■□□□□ 0.37
Smarcc1P97496 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.34■□□□□ 0.37
Smarcc1P97496 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Smarcc1P97496 Itm2b-204ENSMUST00000228637 783 ntBASIC17.34■□□□□ 0.37
Smarcc1P97496 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Smarcc1P97496 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcc1P97496 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smarcc1P97496 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Smarcc1P97496 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms