Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Gm8584-201ENSMUST00000171982 758 ntBASIC12.44□□□□□ -0.42
SgcbP82349 Gm4804-201ENSMUST00000182234 999 ntBASIC12.44□□□□□ -0.42
SgcbP82349 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.44□□□□□ -0.42
SgcbP82349 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.44□□□□□ -0.42
SgcbP82349 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.44□□□□□ -0.42
SgcbP82349 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.44□□□□□ -0.42
SgcbP82349 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.44□□□□□ -0.42
SgcbP82349 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.43□□□□□ -0.42
SgcbP82349 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
SgcbP82349 Syt7-204ENSMUST00000223586 1344 ntBASIC12.43□□□□□ -0.42
SgcbP82349 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.43□□□□□ -0.42
SgcbP82349 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.43□□□□□ -0.42
SgcbP82349 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
SgcbP82349 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SgcbP82349 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.43□□□□□ -0.42
SgcbP82349 Gm16215-201ENSMUST00000161990 637 ntBASIC12.43□□□□□ -0.42
SgcbP82349 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SgcbP82349 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SgcbP82349 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SgcbP82349 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SgcbP82349 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SgcbP82349 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SgcbP82349 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
SgcbP82349 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcbP82349 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.42□□□□□ -0.42
SgcbP82349 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SgcbP82349 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.42□□□□□ -0.42
SgcbP82349 Gm9522-201ENSMUST00000182394 926 ntBASIC12.42□□□□□ -0.42
SgcbP82349 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Gm7730-201ENSMUST00000212486 454 ntBASIC12.42□□□□□ -0.42
SgcbP82349 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SgcbP82349 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms