Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Fdft1P53798 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Gm8584-201ENSMUST00000171982 758 ntBASIC13.95□□□□□ -0.18
Fdft1P53798 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.95□□□□□ -0.18
Fdft1P53798 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Fdft1P53798 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.95□□□□□ -0.18
Fdft1P53798 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.95□□□□□ -0.18
Fdft1P53798 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Fdft1P53798 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Fdft1P53798 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Fdft1P53798 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.94□□□□□ -0.18
Fdft1P53798 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.94□□□□□ -0.18
Fdft1P53798 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Fdft1P53798 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Fdft1P53798 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Fdft1P53798 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.94□□□□□ -0.18
Fdft1P53798 Gm13823-201ENSMUST00000119930 345 ntBASIC13.94□□□□□ -0.18
Fdft1P53798 Gm6222-201ENSMUST00000120787 396 ntBASIC13.94□□□□□ -0.18
Fdft1P53798 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Fdft1P53798 Gm6736-201ENSMUST00000166583 948 ntBASIC13.94□□□□□ -0.18
Fdft1P53798 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.94□□□□□ -0.18
Fdft1P53798 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Fdft1P53798 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Fdft1P53798 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.94□□□□□ -0.18
Fdft1P53798 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.94□□□□□ -0.18
Fdft1P53798 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fdft1P53798 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.93□□□□□ -0.18
Fdft1P53798 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Fdft1P53798 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.93□□□□□ -0.18
Fdft1P53798 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.93□□□□□ -0.18
Fdft1P53798 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Fdft1P53798 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Gm24158-201ENSMUST00000175263 71 ntBASIC13.93□□□□□ -0.18
Fdft1P53798 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.93□□□□□ -0.18
Fdft1P53798 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.93□□□□□ -0.18
Fdft1P53798 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Fdft1P53798 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.93□□□□□ -0.18
Fdft1P53798 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Fdft1P53798 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Fdft1P53798 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fdft1P53798 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.92□□□□□ -0.18
Fdft1P53798 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Fdft1P53798 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.92□□□□□ -0.18
Fdft1P53798 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.92□□□□□ -0.18
Fdft1P53798 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fdft1P53798 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms