Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdx1P52946 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Pdx1P52946 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pdx1P52946 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pdx1P52946 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.78□□□□□ -0.2
Pdx1P52946 Gm12585-201ENSMUST00000117307 290 ntBASIC13.78□□□□□ -0.2
Pdx1P52946 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Pdx1P52946 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.78□□□□□ -0.2
Pdx1P52946 Gm29741-201ENSMUST00000192667 421 ntBASIC13.78□□□□□ -0.2
Pdx1P52946 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.78□□□□□ -0.2
Pdx1P52946 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.78□□□□□ -0.2
Pdx1P52946 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.78□□□□□ -0.2
Pdx1P52946 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pdx1P52946 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.78□□□□□ -0.2
Pdx1P52946 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pdx1P52946 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.78□□□□□ -0.2
Pdx1P52946 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.78□□□□□ -0.2
Pdx1P52946 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdx1P52946 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pdx1P52946 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdx1P52946 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pdx1P52946 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pdx1P52946 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Pdx1P52946 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
Pdx1P52946 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pdx1P52946 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.77□□□□□ -0.21
Pdx1P52946 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.77□□□□□ -0.21
Pdx1P52946 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Pdx1P52946 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pdx1P52946 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Pdx1P52946 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.77□□□□□ -0.21
Pdx1P52946 Mir8102-201ENSMUST00000184148 139 ntBASIC13.77□□□□□ -0.21
Pdx1P52946 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.77□□□□□ -0.21
Pdx1P52946 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.77□□□□□ -0.21
Pdx1P52946 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdx1P52946 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pdx1P52946 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pdx1P52946 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Pdx1P52946 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pdx1P52946 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdx1P52946 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdx1P52946 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.76□□□□□ -0.21
Pdx1P52946 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.76□□□□□ -0.21
Pdx1P52946 Mir7684-201ENSMUST00000183858 60 ntBASIC13.76□□□□□ -0.21
Pdx1P52946 Gm10576-201ENSMUST00000191927 825 ntBASIC13.76□□□□□ -0.21
Pdx1P52946 Gm10766-202ENSMUST00000194123 606 ntBASIC13.76□□□□□ -0.21
Pdx1P52946 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.76□□□□□ -0.21
Pdx1P52946 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pdx1P52946 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pdx1P52946 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pdx1P52946 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms