Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.87□□□□□ -0.51
Srp9P49962 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.87□□□□□ -0.51
Srp9P49962 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.87□□□□□ -0.51
Srp9P49962 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Gm15427-201ENSMUST00000117288 531 ntBASIC11.87□□□□□ -0.51
Srp9P49962 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.87□□□□□ -0.51
Srp9P49962 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.87□□□□□ -0.51
Srp9P49962 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.87□□□□□ -0.51
Srp9P49962 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.87□□□□□ -0.51
Srp9P49962 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.87□□□□□ -0.51
Srp9P49962 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.87□□□□□ -0.51
Srp9P49962 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.87□□□□□ -0.51
Srp9P49962 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Srp9P49962 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Srp9P49962 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Srp9P49962 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Srp9P49962 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Srp9P49962 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Srp9P49962 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp9P49962 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp9P49962 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp9P49962 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp9P49962 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Srp9P49962 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Srp9P49962 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp9P49962 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
Srp9P49962 Gm8000-201ENSMUST00000188378 592 ntBASIC11.86□□□□□ -0.51
Srp9P49962 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp9P49962 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.86□□□□□ -0.51
Srp9P49962 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.86□□□□□ -0.51
Srp9P49962 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.86□□□□□ -0.51
Srp9P49962 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.86□□□□□ -0.51
Srp9P49962 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp9P49962 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.86□□□□□ -0.51
Srp9P49962 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp9P49962 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp9P49962 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.85□□□□□ -0.51
Srp9P49962 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Srp9P49962 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.85□□□□□ -0.51
Srp9P49962 Gm11779-201ENSMUST00000118541 368 ntBASIC11.85□□□□□ -0.51
Srp9P49962 Gm11543-201ENSMUST00000120758 370 ntBASIC11.85□□□□□ -0.51
Srp9P49962 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srp9P49962 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.85□□□□□ -0.51
Srp9P49962 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.85□□□□□ -0.51
Srp9P49962 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Srp9P49962 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.85□□□□□ -0.51
Srp9P49962 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms