Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.25□□□□□ -0.13
Cxcl12P40224 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Gm12176-201ENSMUST00000121420 875 ntBASIC14.25□□□□□ -0.13
Cxcl12P40224 Gm22902-201ENSMUST00000158488 302 ntBASIC14.25□□□□□ -0.13
Cxcl12P40224 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.25□□□□□ -0.13
Cxcl12P40224 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cxcl12P40224 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl12P40224 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.24□□□□□ -0.13
Cxcl12P40224 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.24□□□□□ -0.13
Cxcl12P40224 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.24□□□□□ -0.13
Cxcl12P40224 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Gm6023-201ENSMUST00000118217 606 ntBASIC14.24□□□□□ -0.13
Cxcl12P40224 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cxcl12P40224 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Gm38144-201ENSMUST00000192790 465 ntBASIC14.24□□□□□ -0.13
Cxcl12P40224 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.24□□□□□ -0.13
Cxcl12P40224 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.24□□□□□ -0.13
Cxcl12P40224 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.24□□□□□ -0.13
Cxcl12P40224 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Gm16372-201ENSMUST00000073088 450 ntBASIC14.24□□□□□ -0.13
Cxcl12P40224 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cxcl12P40224 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Cxcl12P40224 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl12P40224 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cxcl12P40224 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Cxcl12P40224 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.23□□□□□ -0.13
Cxcl12P40224 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cxcl12P40224 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Cxcl12P40224 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.23□□□□□ -0.13
Cxcl12P40224 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.23□□□□□ -0.13
Cxcl12P40224 Gm27341-201ENSMUST00000183570 106 ntBASIC14.23□□□□□ -0.13
Cxcl12P40224 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.23□□□□□ -0.13
Cxcl12P40224 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl12P40224 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cxcl12P40224 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cxcl12P40224 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cxcl12P40224 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms