Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1P40201 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1P40201 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1P40201 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Chd1P40201 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Chd1P40201 Gm17040-202ENSMUST00000170597 889 ntBASIC20.48■□□□□ 0.87
Chd1P40201 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1P40201 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1P40201 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1P40201 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1P40201 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1P40201 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1P40201 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Chd1P40201 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Chd1P40201 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Chd1P40201 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC20.48■□□□□ 0.87
Chd1P40201 Gm4993-201ENSMUST00000118719 1174 ntBASIC20.47■□□□□ 0.87
Chd1P40201 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC20.47■□□□□ 0.87
Chd1P40201 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC20.47■□□□□ 0.87
Chd1P40201 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC20.47■□□□□ 0.87
Chd1P40201 Gm6458-201ENSMUST00000211573 635 ntBASIC20.47■□□□□ 0.87
Chd1P40201 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC20.47■□□□□ 0.87
Chd1P40201 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Chd1P40201 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.47■□□□□ 0.87
Chd1P40201 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC20.47■□□□□ 0.87
Chd1P40201 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.47■□□□□ 0.87
Chd1P40201 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC20.47■□□□□ 0.87
Chd1P40201 Gm14371-201ENSMUST00000138925 1518 ntBASIC20.47■□□□□ 0.87
Chd1P40201 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC20.47■□□□□ 0.87
Chd1P40201 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Chd1P40201 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC20.47■□□□□ 0.87
Chd1P40201 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1P40201 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Chd1P40201 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC20.46■□□□□ 0.87
Chd1P40201 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Chd1P40201 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Chd1P40201 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Gm17208-201ENSMUST00000168388 535 ntBASIC20.46■□□□□ 0.87
Chd1P40201 Gm7600-201ENSMUST00000209657 785 ntBASIC20.46■□□□□ 0.87
Chd1P40201 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC20.46■□□□□ 0.87
Chd1P40201 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Chd1P40201 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1P40201 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Chd1P40201 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Chd1P40201 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Chd1P40201 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Chd1P40201 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1P40201 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1P40201 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1P40201 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Chd1P40201 Gm15131-201ENSMUST00000119124 595 ntBASIC20.45■□□□□ 0.86
Chd1P40201 Gm14704-201ENSMUST00000120300 874 ntBASIC20.45■□□□□ 0.86
Chd1P40201 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC20.45■□□□□ 0.86
Chd1P40201 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1P40201 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC20.45■□□□□ 0.86
Chd1P40201 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC20.45■□□□□ 0.86
Chd1P40201 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1P40201 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1P40201 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1P40201 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Chd1P40201 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1P40201 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Chd1P40201 Gm12380-201ENSMUST00000119012 544 ntBASIC20.44■□□□□ 0.86
Chd1P40201 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC20.44■□□□□ 0.86
Chd1P40201 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Chd1P40201 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 AC126444.1-201ENSMUST00000225938 1768 ntBASIC20.44■□□□□ 0.86
Chd1P40201 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC20.44■□□□□ 0.86
Chd1P40201 Gm37666-201ENSMUST00000194110 866 ntBASIC20.44■□□□□ 0.86
Chd1P40201 Gm7003-201ENSMUST00000195089 312 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms