Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Hoxa6P09092 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxa6P09092 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxa6P09092 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa6P09092 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxa6P09092 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa6P09092 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa6P09092 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa6P09092 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa6P09092 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa6P09092 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa6P09092 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa6P09092 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa6P09092 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.02□□□□□ -0.49
Hoxa6P09092 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Gm5279-201ENSMUST00000199575 745 ntBASIC12.02□□□□□ -0.49
Hoxa6P09092 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Gm7653-201ENSMUST00000214567 508 ntBASIC12.02□□□□□ -0.49
Hoxa6P09092 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.02□□□□□ -0.49
Hoxa6P09092 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hoxa6P09092 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa6P09092 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa6P09092 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hoxa6P09092 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Hoxa6P09092 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.01□□□□□ -0.49
Hoxa6P09092 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxa6P09092 Mir6392-201ENSMUST00000184924 108 ntBASIC12.01□□□□□ -0.49
Hoxa6P09092 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxa6P09092 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.01□□□□□ -0.49
Hoxa6P09092 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.01□□□□□ -0.49
Hoxa6P09092 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa6P09092 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxa6P09092 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Hoxa6P09092 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.01□□□□□ -0.49
Hoxa6P09092 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.01□□□□□ -0.49
Hoxa6P09092 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.01□□□□□ -0.49
Hoxa6P09092 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.01□□□□□ -0.49
Hoxa6P09092 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa6P09092 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa6P09092 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa6P09092 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Hoxa6P09092 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12□□□□□ -0.49
Hoxa6P09092 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxa6P09092 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa6P09092 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa6P09092 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms