Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Gm11960-202ENSMUST00000181063 2858 ntBASIC13□□□□□ -0.33
Sod1P08228 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13□□□□□ -0.33
Sod1P08228 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Gm18222-201ENSMUST00000202416 1387 ntBASIC13□□□□□ -0.33
Sod1P08228 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Sod1P08228 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13□□□□□ -0.33
Sod1P08228 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13□□□□□ -0.33
Sod1P08228 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13□□□□□ -0.33
Sod1P08228 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13□□□□□ -0.33
Sod1P08228 Gm19309-201ENSMUST00000218295 205 ntBASIC13□□□□□ -0.33
Sod1P08228 Rassf8-202ENSMUST00000058538 1131 ntBASIC13□□□□□ -0.33
Sod1P08228 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sod1P08228 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13□□□□□ -0.33
Sod1P08228 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sod1P08228 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.99□□□□□ -0.33
Sod1P08228 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Gm1335-201ENSMUST00000121653 386 ntBASIC12.99□□□□□ -0.33
Sod1P08228 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Sod1P08228 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Gm19184-201ENSMUST00000196798 928 ntBASIC12.99□□□□□ -0.33
Sod1P08228 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Gm6013-201ENSMUST00000212264 699 ntBASIC12.99□□□□□ -0.33
Sod1P08228 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sod1P08228 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Olfr582-201ENSMUST00000098212 960 ntBASIC12.99□□□□□ -0.33
Sod1P08228 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sod1P08228 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sod1P08228 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.99□□□□□ -0.33
Sod1P08228 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sod1P08228 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Sod1P08228 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sod1P08228 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.98□□□□□ -0.33
Sod1P08228 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.98□□□□□ -0.33
Sod1P08228 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.98□□□□□ -0.33
Sod1P08228 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.98□□□□□ -0.33
Sod1P08228 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.98□□□□□ -0.33
Sod1P08228 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sod1P08228 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sod1P08228 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms