Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.24□□□□□ -0.45
P04224 Gm45167-201ENSMUST00000208007 322 ntBASIC12.24□□□□□ -0.45
P04224 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.24□□□□□ -0.45
P04224 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
P04224 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.24□□□□□ -0.45
P04224 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04224 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04224 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
P04224 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P04224 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.23□□□□□ -0.45
P04224 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.23□□□□□ -0.45
P04224 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04224 Gm9726-201ENSMUST00000180321 678 ntBASIC12.23□□□□□ -0.45
P04224 Gm6550-201ENSMUST00000187574 993 ntBASIC12.23□□□□□ -0.45
P04224 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.23□□□□□ -0.45
P04224 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.23□□□□□ -0.45
P04224 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
P04224 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P04224 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.23□□□□□ -0.45
P04224 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.23□□□□□ -0.45
P04224 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04224 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.22□□□□□ -0.45
P04224 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.22□□□□□ -0.45
P04224 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P04224 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P04224 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Gm11764-201ENSMUST00000120221 623 ntBASIC12.22□□□□□ -0.45
P04224 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.22□□□□□ -0.45
P04224 Gm7230-201ENSMUST00000173026 815 ntBASIC12.22□□□□□ -0.45
P04224 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Gm27459-201ENSMUST00000184860 107 ntBASIC12.22□□□□□ -0.45
P04224 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.22□□□□□ -0.45
P04224 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04224 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P04224 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.21□□□□□ -0.45
P04224 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04224 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04224 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.21□□□□□ -0.45
P04224 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
P04224 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
P04224 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms