Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Gm6916-202ENSMUST00000205523 195 ntBASIC14.05□□□□□ -0.16
Dnmt3aO88508 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Gm9063-201ENSMUST00000223299 582 ntBASIC14.05□□□□□ -0.16
Dnmt3aO88508 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.05□□□□□ -0.16
Dnmt3aO88508 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.05□□□□□ -0.16
Dnmt3aO88508 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Dnmt3aO88508 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Dnmt3aO88508 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.04□□□□□ -0.16
Dnmt3aO88508 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Gm27321-201ENSMUST00000185021 205 ntBASIC14.04□□□□□ -0.16
Dnmt3aO88508 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.04□□□□□ -0.16
Dnmt3aO88508 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.04□□□□□ -0.16
Dnmt3aO88508 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dnmt3aO88508 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Dnmt3aO88508 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.03□□□□□ -0.16
Dnmt3aO88508 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Gm25925-201ENSMUST00000158314 306 ntBASIC14.03□□□□□ -0.16
Dnmt3aO88508 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.03□□□□□ -0.16
Dnmt3aO88508 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.03□□□□□ -0.16
Dnmt3aO88508 Gm20949-201ENSMUST00000206478 952 ntBASIC14.03□□□□□ -0.16
Dnmt3aO88508 Gm44608-201ENSMUST00000206827 855 ntBASIC14.03□□□□□ -0.16
Dnmt3aO88508 Gm9229-201ENSMUST00000222777 126 ntBASIC14.03□□□□□ -0.16
Dnmt3aO88508 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Dnmt3aO88508 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms