Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.34□□□□□ -0.11
Sdc4O35988 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.34□□□□□ -0.11
Sdc4O35988 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.34□□□□□ -0.11
Sdc4O35988 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.34□□□□□ -0.11
Sdc4O35988 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.34□□□□□ -0.11
Sdc4O35988 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.34□□□□□ -0.11
Sdc4O35988 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sdc4O35988 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Sdc4O35988 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sdc4O35988 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Sdc4O35988 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sdc4O35988 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sdc4O35988 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.33□□□□□ -0.12
Sdc4O35988 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.33□□□□□ -0.12
Sdc4O35988 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.33□□□□□ -0.12
Sdc4O35988 Gm12138-201ENSMUST00000122180 951 ntBASIC14.33□□□□□ -0.12
Sdc4O35988 Gm8584-201ENSMUST00000171982 758 ntBASIC14.33□□□□□ -0.12
Sdc4O35988 Gm27772-201ENSMUST00000184900 187 ntBASIC14.33□□□□□ -0.12
Sdc4O35988 Gm29741-201ENSMUST00000192667 421 ntBASIC14.33□□□□□ -0.12
Sdc4O35988 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.33□□□□□ -0.12
Sdc4O35988 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.33□□□□□ -0.12
Sdc4O35988 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.33□□□□□ -0.12
Sdc4O35988 Gm18307-201ENSMUST00000206864 949 ntBASIC14.33□□□□□ -0.12
Sdc4O35988 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.33□□□□□ -0.12
Sdc4O35988 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.33□□□□□ -0.12
Sdc4O35988 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.33□□□□□ -0.12
Sdc4O35988 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Sdc4O35988 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.33□□□□□ -0.12
Sdc4O35988 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc4O35988 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Sdc4O35988 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sdc4O35988 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.33□□□□□ -0.12
Sdc4O35988 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sdc4O35988 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sdc4O35988 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sdc4O35988 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.32□□□□□ -0.12
Sdc4O35988 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Sdc4O35988 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.32□□□□□ -0.12
Sdc4O35988 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sdc4O35988 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.32□□□□□ -0.12
Sdc4O35988 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.32□□□□□ -0.12
Sdc4O35988 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.32□□□□□ -0.12
Sdc4O35988 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.32□□□□□ -0.12
Sdc4O35988 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.32□□□□□ -0.12
Sdc4O35988 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.32□□□□□ -0.12
Sdc4O35988 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sdc4O35988 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms