Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.69□□□□□ -0.22
Bhlhe40O35185 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.69□□□□□ -0.22
Bhlhe40O35185 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.69□□□□□ -0.22
Bhlhe40O35185 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Gm8602-201ENSMUST00000184045 607 ntBASIC13.69□□□□□ -0.22
Bhlhe40O35185 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.69□□□□□ -0.22
Bhlhe40O35185 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.69□□□□□ -0.22
Bhlhe40O35185 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.69□□□□□ -0.22
Bhlhe40O35185 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.69□□□□□ -0.22
Bhlhe40O35185 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.69□□□□□ -0.22
Bhlhe40O35185 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.69□□□□□ -0.22
Bhlhe40O35185 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Bhlhe40O35185 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.68□□□□□ -0.22
Bhlhe40O35185 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.68□□□□□ -0.22
Bhlhe40O35185 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Bhlhe40O35185 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.67□□□□□ -0.22
Bhlhe40O35185 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.67□□□□□ -0.22
Bhlhe40O35185 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Bhlhe40O35185 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.67□□□□□ -0.22
Bhlhe40O35185 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms