Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Polr1aO35134 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Gm13297-201ENSMUST00000120205 934 ntBASIC21.05■□□□□ 0.96
Polr1aO35134 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Polr1aO35134 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC21.05■□□□□ 0.96
Polr1aO35134 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Polr1aO35134 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Polr1aO35134 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Polr1aO35134 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC21.04■□□□□ 0.96
Polr1aO35134 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Polr1aO35134 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Polr1aO35134 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
Polr1aO35134 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC21.04■□□□□ 0.96
Polr1aO35134 Rn7s1-201ENSMUST00000174924 300 ntBASIC21.04■□□□□ 0.96
Polr1aO35134 Rn7s2-201ENSMUST00000175032 300 ntBASIC21.04■□□□□ 0.96
Polr1aO35134 Gm26461-201ENSMUST00000175064 290 ntBASIC21.04■□□□□ 0.96
Polr1aO35134 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC21.04■□□□□ 0.96
Polr1aO35134 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Polr1aO35134 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Polr1aO35134 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Gm44207-201ENSMUST00000204568 1424 ntBASIC21.03■□□□□ 0.96
Polr1aO35134 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Polr1aO35134 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Gm4768-201ENSMUST00000206199 686 ntBASIC21.03■□□□□ 0.96
Polr1aO35134 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr1aO35134 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Gm12134-201ENSMUST00000122109 520 ntBASIC21.02■□□□□ 0.96
Polr1aO35134 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC21.02■□□□□ 0.96
Polr1aO35134 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr1aO35134 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Polr1aO35134 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Gm43423-201ENSMUST00000198390 2094 ntBASIC21.01■□□□□ 0.95
Polr1aO35134 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Polr1aO35134 Gm14381-201ENSMUST00000122105 414 ntBASIC21.01■□□□□ 0.95
Polr1aO35134 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Polr1aO35134 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC21.01■□□□□ 0.95
Polr1aO35134 Gm9176-201ENSMUST00000219955 1120 ntBASIC21.01■□□□□ 0.95
Polr1aO35134 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC21.01■□□□□ 0.95
Polr1aO35134 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms