Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm10175-201ENSMUST00000086013 645 ntBASIC16.58■□□□□ 0.24
Hdac1O09106 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hdac1O09106 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Hdac1O09106 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac1O09106 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac1O09106 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac1O09106 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hdac1O09106 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.58■□□□□ 0.24
Hdac1O09106 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hdac1O09106 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac1O09106 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac1O09106 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hdac1O09106 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Hdac1O09106 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac1O09106 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac1O09106 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Hdac1O09106 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Hdac1O09106 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hdac1O09106 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.57■□□□□ 0.24
Hdac1O09106 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hdac1O09106 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hdac1O09106 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.57■□□□□ 0.24
Hdac1O09106 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Hdac1O09106 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Hdac1O09106 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.57■□□□□ 0.24
Hdac1O09106 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.57■□□□□ 0.24
Hdac1O09106 Gm37714-201ENSMUST00000194742 342 ntBASIC16.57■□□□□ 0.24
Hdac1O09106 Gm6443-201ENSMUST00000203599 874 ntBASIC16.57■□□□□ 0.24
Hdac1O09106 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hdac1O09106 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac1O09106 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hdac1O09106 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.56■□□□□ 0.24
Hdac1O09106 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.56■□□□□ 0.24
Hdac1O09106 Gm17271-201ENSMUST00000165535 355 ntBASIC16.56■□□□□ 0.24
Hdac1O09106 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Hdac1O09106 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.56■□□□□ 0.24
Hdac1O09106 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Mir125a-201ENSMUST00000083545 68 ntBASIC16.56■□□□□ 0.24
Hdac1O09106 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hdac1O09106 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac1O09106 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac1O09106 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hdac1O09106 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac1O09106 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hdac1O09106 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.55■□□□□ 0.24
Hdac1O09106 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.55■□□□□ 0.24
Hdac1O09106 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Hdac1O09106 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hdac1O09106 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac1O09106 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac1O09106 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac1O09106 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Hdac1O09106 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms