Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ebf3O08791 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ebf3O08791 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.49□□□□□ -0.09
Ebf3O08791 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Gm15824-201ENSMUST00000119516 955 ntBASIC14.49□□□□□ -0.09
Ebf3O08791 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.49□□□□□ -0.09
Ebf3O08791 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.49□□□□□ -0.09
Ebf3O08791 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Ebf3O08791 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ebf3O08791 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Ebf3O08791 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.49□□□□□ -0.09
Ebf3O08791 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Ebf3O08791 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf3O08791 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.48□□□□□ -0.09
Ebf3O08791 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.48□□□□□ -0.09
Ebf3O08791 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ebf3O08791 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ebf3O08791 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.48□□□□□ -0.09
Ebf3O08791 Gm15806-201ENSMUST00000120696 955 ntBASIC14.48□□□□□ -0.09
Ebf3O08791 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.48□□□□□ -0.09
Ebf3O08791 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.48□□□□□ -0.09
Ebf3O08791 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Gm5354-201ENSMUST00000182417 973 ntBASIC14.48□□□□□ -0.09
Ebf3O08791 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.48□□□□□ -0.09
Ebf3O08791 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.48□□□□□ -0.09
Ebf3O08791 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.48□□□□□ -0.09
Ebf3O08791 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf3O08791 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.48□□□□□ -0.09
Ebf3O08791 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Carlr-201ENSMUST00000181515 2574 ntBASIC14.47□□□□□ -0.09
Ebf3O08791 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ebf3O08791 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.47□□□□□ -0.09
Ebf3O08791 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ebf3O08791 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.47□□□□□ -0.09
Ebf3O08791 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.47□□□□□ -0.09
Ebf3O08791 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ebf3O08791 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.47□□□□□ -0.09
Ebf3O08791 Gm21470-201ENSMUST00000187680 696 ntBASIC14.47□□□□□ -0.09
Ebf3O08791 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.47□□□□□ -0.09
Ebf3O08791 Gm44719-201ENSMUST00000206404 149 ntBASIC14.47□□□□□ -0.09
Ebf3O08791 Gm18062-201ENSMUST00000208020 547 ntBASIC14.47□□□□□ -0.09
Ebf3O08791 Gm18055-201ENSMUST00000208254 547 ntBASIC14.47□□□□□ -0.09
Ebf3O08791 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.47□□□□□ -0.09
Ebf3O08791 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.47□□□□□ -0.09
Ebf3O08791 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.47□□□□□ -0.09
Ebf3O08791 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.47□□□□□ -0.09
Ebf3O08791 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ebf3O08791 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.46□□□□□ -0.09
Ebf3O08791 Gm12341-201ENSMUST00000119724 503 ntBASIC14.46□□□□□ -0.09
Ebf3O08791 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms