Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Mir3113-201ENSMUST00000175478 76 ntBASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Thap2-203ENSMUST00000218989 527 ntBASIC12.15□□□□□ -0.46
Cldn20G5E8X0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Cldn20G5E8X0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn20G5E8X0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn20G5E8X0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn20G5E8X0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Cldn20G5E8X0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Mir8117-201ENSMUST00000184773 107 ntBASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Gm45747-201ENSMUST00000212203 999 ntBASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.14□□□□□ -0.47
Cldn20G5E8X0 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cldn20G5E8X0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Gm16198-201ENSMUST00000118766 670 ntBASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Gm9726-201ENSMUST00000180321 678 ntBASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Gm44492-201ENSMUST00000197012 141 ntBASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cldn20G5E8X0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms