Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.07□□□□□ -0.32
Colca2F8VPY8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Colca2F8VPY8 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.07□□□□□ -0.32
Colca2F8VPY8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Efs-202ENSMUST00000227037 2540 ntBASIC13.06□□□□□ -0.32
Colca2F8VPY8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Gm7809-201ENSMUST00000153199 742 ntBASIC13.06□□□□□ -0.32
Colca2F8VPY8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.06□□□□□ -0.32
Colca2F8VPY8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.06□□□□□ -0.32
Colca2F8VPY8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.06□□□□□ -0.32
Colca2F8VPY8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.05□□□□□ -0.32
Colca2F8VPY8 Gm2445-201ENSMUST00000182798 989 ntBASIC13.05□□□□□ -0.32
Colca2F8VPY8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Gm44069-201ENSMUST00000204898 506 ntBASIC13.05□□□□□ -0.32
Colca2F8VPY8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.05□□□□□ -0.32
Colca2F8VPY8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.05□□□□□ -0.32
Colca2F8VPY8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Colca2F8VPY8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms