Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a3A2ACT7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a3A2ACT7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a3A2ACT7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a3A2ACT7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.52□□□□□ -0.24
Col9a3A2ACT7 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.52□□□□□ -0.24
Col9a3A2ACT7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a3A2ACT7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a3A2ACT7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a3A2ACT7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a3A2ACT7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Mir8109-201ENSMUST00000184375 117 ntBASIC13.52□□□□□ -0.25
Col9a3A2ACT7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Gm19309-201ENSMUST00000218295 205 ntBASIC13.52□□□□□ -0.25
Col9a3A2ACT7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a3A2ACT7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Gm10156-201ENSMUST00000122364 462 ntBASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Gm29608-201ENSMUST00000190444 463 ntBASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Gm45930-201ENSMUST00000221330 292 ntBASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.51□□□□□ -0.25
Col9a3A2ACT7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm22018-201ENSMUST00000104357 131 ntBASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a3A2ACT7 Gm12203-201ENSMUST00000118235 598 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms