Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn2Q9R0A1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Gm15693-201ENSMUST00000120470 637 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Gm10275-202ENSMUST00000168697 495 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Gm45098-201ENSMUST00000207179 657 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Gm10275-201ENSMUST00000092620 635 ntBASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.28□□□□□ -0.12
Clcn2Q9R0A1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
Clcn2Q9R0A1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 Gm13616-201ENSMUST00000120600 222 ntBASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.27□□□□□ -0.13
Clcn2Q9R0A1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms