Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm14042-201ENSMUST00000120139 833 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm8825-201ENSMUST00000182565 998 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm4518-201ENSMUST00000182638 718 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smco4Q9JIS3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.15□□□□□ -0.62
Smco4Q9JIS3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms