Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm4864-201ENSMUST00000219894 1461 ntBASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gm22121-201ENSMUST00000175148 54 ntBASIC18.56■□□□□ 0.56
Scn4aQ9ER60 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Rprl1-202ENSMUST00000198476 238 ntBASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gm44651-201ENSMUST00000207343 372 ntBASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gm8228-201ENSMUST00000189949 2192 ntBASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4aQ9ER60 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4aQ9ER60 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Gm12539-201ENSMUST00000121549 1098 ntBASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scn4aQ9ER60 Gm11978-201ENSMUST00000122315 466 ntBASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4aQ9ER60 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms