Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssmem1Q9D9Y8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Gm44855-201ENSMUST00000205725 362 ntBASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssmem1Q9D9Y8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms