Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.14□□□□□ -0.15
Sf3a3Q9D554 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Gm12895-201ENSMUST00000122214 226 ntBASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Olfr286-202ENSMUST00000205305 969 ntBASIC14.13□□□□□ -0.15
Sf3a3Q9D554 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3a3Q9D554 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gm10252-201ENSMUST00000209541 832 ntBASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms