Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Gm15460-201ENSMUST00000118147 391 ntBASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Gm44855-201ENSMUST00000205725 362 ntBASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ssbp3Q9D032 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gm12585-201ENSMUST00000117307 290 ntBASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gm29667-201ENSMUST00000190817 490 ntBASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gm44608-201ENSMUST00000206827 855 ntBASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gm2423-201ENSMUST00000074863 733 ntBASIC11.65□□□□□ -0.54
Ssbp3Q9D032 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssbp3Q9D032 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.55
Ssbp3Q9D032 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Ssbp3Q9D032 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ssbp3Q9D032 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Ssbp3Q9D032 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ssbp3Q9D032 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Gm15321-201ENSMUST00000121290 288 ntBASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.64□□□□□ -0.55
Ssbp3Q9D032 Gm23547-201ENSMUST00000158210 271 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms