Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 BC001981-202ENSMUST00000191393 1545 ntBASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Gm9103-201ENSMUST00000119371 405 ntBASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Gm29741-201ENSMUST00000192667 421 ntBASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.86□□□□□ -0.19
Ssu72Q9CY97 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssu72Q9CY97 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm29310-201ENSMUST00000185468 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21825-201ENSMUST00000185728 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm29109-201ENSMUST00000185895 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21896-201ENSMUST00000186520 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21873-201ENSMUST00000186728 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21794-201ENSMUST00000187056 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21880-201ENSMUST00000187275 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21826-201ENSMUST00000187451 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21198-201ENSMUST00000188393 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21749-201ENSMUST00000189343 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21901-201ENSMUST00000189568 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm29424-201ENSMUST00000189716 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm28599-201ENSMUST00000189838 694 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21867-201ENSMUST00000189917 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm29269-201ENSMUST00000190087 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21722-201ENSMUST00000190153 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm28423-201ENSMUST00000190701 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21899-201ENSMUST00000190745 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21910-201ENSMUST00000191163 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21849-201ENSMUST00000191571 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm28678-201ENSMUST00000191593 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm20910-201ENSMUST00000193268 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm21871-201ENSMUST00000194621 696 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms