Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm8584-201ENSMUST00000171982 758 ntBASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otud1Q9CUB6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Gm14928-201ENSMUST00000120198 477 ntBASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 CT009764.1-201ENSMUST00000222260 483 ntBASIC13.21□□□□□ -0.29
Otud1Q9CUB6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Mir497b-201ENSMUST00000093601 125 ntBASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otud1Q9CUB6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.21□□□□□ -0.29
Otud1Q9CUB6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.21□□□□□ -0.3
Otud1Q9CUB6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Otud1Q9CUB6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otud1Q9CUB6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otud1Q9CUB6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otud1Q9CUB6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms