Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trim11Q99PQ2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim11Q99PQ2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim11Q99PQ2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim11Q99PQ2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim11Q99PQ2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Trim11Q99PQ2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim11Q99PQ2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim11Q99PQ2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Gm2445-201ENSMUST00000182798 989 ntBASIC15.93■□□□□ 0.14
Trim11Q99PQ2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Dupd1-202ENSMUST00000224735 548 ntBASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim11Q99PQ2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Gm18027-201ENSMUST00000218947 619 ntBASIC15.92■□□□□ 0.14
Trim11Q99PQ2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim11Q99PQ2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trim11Q99PQ2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim11Q99PQ2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms