Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Gm26315-201ENSMUST00000083890 321 ntBASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdh23Q99PF4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Gm14726-201ENSMUST00000120623 896 ntBASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Gm30285-201ENSMUST00000214614 422 ntBASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Mospd4-201ENSMUST00000180618 576 ntBASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh23Q99PF4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm43058-201ENSMUST00000197645 625 ntBASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm11618-201ENSMUST00000117946 267 ntBASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Cdh23Q99PF4 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms