Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 BC001981-202ENSMUST00000191393 1545 ntBASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Gm15467-201ENSMUST00000120582 445 ntBASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Gm11745-201ENSMUST00000121669 448 ntBASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Rprl2-201ENSMUST00000157150 290 ntBASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 AA619741-201ENSMUST00000195095 646 ntBASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdk5rap3Q99LM2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap3Q99LM2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Gm13823-201ENSMUST00000119930 345 ntBASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Gm6222-201ENSMUST00000120787 396 ntBASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Gm2445-201ENSMUST00000182798 989 ntBASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap3Q99LM2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms