Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.03■□□□□ 0.16
Rfc4Q99J62 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.03■□□□□ 0.16
Rfc4Q99J62 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.03■□□□□ 0.16
Rfc4Q99J62 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Gm13612-201ENSMUST00000119276 390 ntBASIC16.03■□□□□ 0.16
Rfc4Q99J62 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.03■□□□□ 0.16
Rfc4Q99J62 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.03■□□□□ 0.16
Rfc4Q99J62 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc4Q99J62 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.02■□□□□ 0.16
Rfc4Q99J62 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.02■□□□□ 0.16
Rfc4Q99J62 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Gm44397-201ENSMUST00000195950 113 ntBASIC16.02■□□□□ 0.16
Rfc4Q99J62 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.02■□□□□ 0.16
Rfc4Q99J62 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.02■□□□□ 0.16
Rfc4Q99J62 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc4Q99J62 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfc4Q99J62 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.01■□□□□ 0.15
Rfc4Q99J62 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.01■□□□□ 0.15
Rfc4Q99J62 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Gm12384-201ENSMUST00000119228 919 ntBASIC16.01■□□□□ 0.15
Rfc4Q99J62 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Gm24196-201ENSMUST00000179161 110 ntBASIC16.01■□□□□ 0.15
Rfc4Q99J62 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.01■□□□□ 0.15
Rfc4Q99J62 Gm38223-201ENSMUST00000194484 695 ntBASIC16.01■□□□□ 0.15
Rfc4Q99J62 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.01■□□□□ 0.15
Rfc4Q99J62 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Gm40466-201ENSMUST00000212174 422 ntBASIC16.01■□□□□ 0.15
Rfc4Q99J62 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rfc4Q99J62 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms