Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Gm15957-201ENSMUST00000118893 974 ntBASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Gm27321-201ENSMUST00000185021 205 ntBASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Gm9229-201ENSMUST00000222777 126 ntBASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Gm9063-201ENSMUST00000223299 582 ntBASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha3Q91Y16 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Gm27989-201ENSMUST00000184721 107 ntBASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha3Q91Y16 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha3Q91Y16 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms