Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdha9Q91Y11 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Gm29667-201ENSMUST00000190817 490 ntBASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha9Q91Y11 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha9Q91Y11 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha9Q91Y11 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha9Q91Y11 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha9Q91Y11 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Gm24420-201ENSMUST00000176676 59 ntBASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Gm9522-201ENSMUST00000182394 926 ntBASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Gm10576-201ENSMUST00000191927 825 ntBASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Gm20445-201ENSMUST00000061905 565 ntBASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha9Q91Y11 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Gm24694-201ENSMUST00000180054 110 ntBASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Gm27663-201ENSMUST00000184839 110 ntBASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha9Q91Y11 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms