Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Gm10253-201ENSMUST00000194270 940 ntBASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb8Q91XZ2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Gm6736-201ENSMUST00000166583 948 ntBASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb8Q91XZ2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms