Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Gm18049-201ENSMUST00000208909 581 ntBASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Chchd1-203ENSMUST00000224633 557 ntBASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga3Q91XY5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Gm9824-201ENSMUST00000178707 561 ntBASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga3Q91XY5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhga3Q91XY5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms