Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga4Q91XY4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Gm44344-201ENSMUST00000200287 129 ntBASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Gm20949-201ENSMUST00000206478 952 ntBASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga4Q91XY4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga4Q91XY4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga4Q91XY4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
Pcdhga4Q91XY4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga4Q91XY4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Pcdhga4Q91XY4 Gm13223-201ENSMUST00000118609 747 ntBASIC13.77□□□□□ -0.21
Pcdhga4Q91XY4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga4Q91XY4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms