Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.79□□□□□ -0.2
Vsx1Q91V10 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.78□□□□□ -0.2
Vsx1Q91V10 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm14723-201ENSMUST00000118686 215 ntBASIC13.78□□□□□ -0.2
Vsx1Q91V10 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.78□□□□□ -0.2
Vsx1Q91V10 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm5370-201ENSMUST00000187187 574 ntBASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.78□□□□□ -0.2
Vsx1Q91V10 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.78□□□□□ -0.2
Vsx1Q91V10 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.78□□□□□ -0.2
Vsx1Q91V10 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx1Q91V10 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vsx1Q91V10 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vsx1Q91V10 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Vsx1Q91V10 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Vsx1Q91V10 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vsx1Q91V10 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.77□□□□□ -0.21
Vsx1Q91V10 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Vsx1Q91V10 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx1Q91V10 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.76□□□□□ -0.21
Vsx1Q91V10 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx1Q91V10 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms