Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Gm27731-201ENSMUST00000185192 107 ntBASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp7Q8R1T1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Gm29127-201ENSMUST00000188304 517 ntBASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp7Q8R1T1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm8062-201ENSMUST00000139696 444 ntBASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm24196-201ENSMUST00000179161 110 ntBASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm5161-201ENSMUST00000075243 853 ntBASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm10012-201ENSMUST00000078252 192 ntBASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Chmp7Q8R1T1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp7Q8R1T1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp7Q8R1T1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp7Q8R1T1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp7Q8R1T1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp7Q8R1T1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Chmp7Q8R1T1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Mir6420-201ENSMUST00000185032 102 ntBASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Gm42550-201ENSMUST00000201553 960 ntBASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp7Q8R1T1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms