Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sf3a1Q8K4Z5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sf3a1Q8K4Z5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sf3a1Q8K4Z5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sf3a1Q8K4Z5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sf3a1Q8K4Z5 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.08■□□□□ 0.33
Sf3a1Q8K4Z5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sf3a1Q8K4Z5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sf3a1Q8K4Z5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sf3a1Q8K4Z5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Gm14057-201ENSMUST00000120631 482 ntBASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Gm14719-201ENSMUST00000121891 340 ntBASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Gm27838-201ENSMUST00000184829 128 ntBASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sf3a1Q8K4Z5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms