Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Gm11524-201ENSMUST00000119349 807 ntBASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Gm29741-201ENSMUST00000192667 421 ntBASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Gm5035-201ENSMUST00000215581 927 ntBASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Gm25857-201ENSMUST00000082788 129 ntBASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh3rf2Q8BZT2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Gm15376-201ENSMUST00000122258 783 ntBASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Gm27772-201ENSMUST00000184900 187 ntBASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf2Q8BZT2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms