Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd9Q8BYH8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chd9Q8BYH8 Gm28450-201ENSMUST00000187349 638 ntBASIC10.87□□□□□ -0.67
Chd9Q8BYH8 Gm38144-201ENSMUST00000192790 465 ntBASIC10.87□□□□□ -0.67
Chd9Q8BYH8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd9Q8BYH8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Gm23699-201ENSMUST00000158835 135 ntBASIC10.86□□□□□ -0.67
Chd9Q8BYH8 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Gm38210-201ENSMUST00000191944 809 ntBASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Gm43610-201ENSMUST00000199117 365 ntBASIC10.86□□□□□ -0.67
Chd9Q8BYH8 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chd9Q8BYH8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.85□□□□□ -0.67
Chd9Q8BYH8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Gm26464-201ENSMUST00000157094 305 ntBASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Gm8365-201ENSMUST00000197334 648 ntBASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Gm8325-201ENSMUST00000099086 453 ntBASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd9Q8BYH8 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms