Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Itm2b-204ENSMUST00000228637 783 ntBASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Gm43378-201ENSMUST00000199336 582 ntBASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Gm44100-201ENSMUST00000204329 436 ntBASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.56□□□□□ -0.56
Smg1Q8BKX6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm4986-201ENSMUST00000119731 549 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm11331-201ENSMUST00000119764 288 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm4607-201ENSMUST00000206649 577 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm15957-201ENSMUST00000118893 974 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm14208-201ENSMUST00000119645 678 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smg1Q8BKX6 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Gm8194-201ENSMUST00000159783 859 ntBASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms