Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm44486-201ENSMUST00000198508 138 ntBASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Gm44314-201ENSMUST00000199263 138 ntBASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Gm44394-201ENSMUST00000199558 138 ntBASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Gm44484-201ENSMUST00000199873 138 ntBASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Gm44466-201ENSMUST00000200264 138 ntBASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Gm44359-201ENSMUST00000200671 138 ntBASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc5a7Q8BGY9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Gm25990-201ENSMUST00000102440 86 ntBASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Gm16026-204ENSMUST00000162652 683 ntBASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc5a7Q8BGY9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Gm7977-201ENSMUST00000193787 748 ntBASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms